Class: BiologicalProcessAssociation
An association between an activity and a biological process term
URI: [gocam:BiologicalProcessAssociation](https://w3id.org/gocam/BiologicalProcessAssociation)
[PhaseAssociation](PhaseAssociation.md) | Optional extension describing the phase during which the BP takes place | direct | | [part_of](part_of.md) | 0..1
[BiologicalProcessAssociation](BiologicalProcessAssociation.md) | Optional extension allowing hierarchical nesting of BPs | direct | | [term](term.md) | 0..1
[BiologicalProcessTermObject](BiologicalProcessTermObject.md) | The ontology term that describes the nature of the association | [TermAssociation](TermAssociation.md) | | [type](type.md) | 0..1
[String](String.md) | The type of association | [Association](Association.md) | | [evidence](evidence.md) | *
[EvidenceItem](EvidenceItem.md) | The set of evidence items that support the association | [Association](Association.md) | | [provenances](provenances.md) | *
[ProvenanceInfo](ProvenanceInfo.md) | The set of provenance objects that provide metadata about who made the associ... | [Association](Association.md) | ## Usages | used by | used in | type | used | | --- | --- | --- | --- | | [Activity](Activity.md) | [part_of](part_of.md) | range | [BiologicalProcessAssociation](BiologicalProcessAssociation.md) | | [BiologicalProcessAssociation](BiologicalProcessAssociation.md) | [part_of](part_of.md) | range | [BiologicalProcessAssociation](BiologicalProcessAssociation.md) | ## Identifier and Mapping Information ### Schema Source * from schema: https://w3id.org/gocam ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | gocam:BiologicalProcessAssociation | | native | gocam:BiologicalProcessAssociation | ## LinkML Source ### Direct
### Induced
classDiagram
class BiologicalProcessAssociation
click BiologicalProcessAssociation href "../BiologicalProcessAssociation/"
TermAssociation <|-- BiologicalProcessAssociation
click TermAssociation href "../TermAssociation/"
BiologicalProcessAssociation : evidence
BiologicalProcessAssociation --> "*" EvidenceItem : evidence
click EvidenceItem href "../EvidenceItem/"
BiologicalProcessAssociation : happens_during
BiologicalProcessAssociation --> "0..1" PhaseAssociation : happens_during
click PhaseAssociation href "../PhaseAssociation/"
BiologicalProcessAssociation : part_of
BiologicalProcessAssociation --> "0..1" BiologicalProcessAssociation : part_of
click BiologicalProcessAssociation href "../BiologicalProcessAssociation/"
BiologicalProcessAssociation : provenances
BiologicalProcessAssociation --> "*" ProvenanceInfo : provenances
click ProvenanceInfo href "../ProvenanceInfo/"
BiologicalProcessAssociation : term
BiologicalProcessAssociation --> "0..1" BiologicalProcessTermObject : term
click BiologicalProcessTermObject href "../BiologicalProcessTermObject/"
BiologicalProcessAssociation : type
## Inheritance
* [Association](Association.md)
* [TermAssociation](TermAssociation.md)
* **BiologicalProcessAssociation**
## Slots
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
| [happens_during](happens_during.md) | 0..1 [PhaseAssociation](PhaseAssociation.md) | Optional extension describing the phase during which the BP takes place | direct | | [part_of](part_of.md) | 0..1
[BiologicalProcessAssociation](BiologicalProcessAssociation.md) | Optional extension allowing hierarchical nesting of BPs | direct | | [term](term.md) | 0..1
[BiologicalProcessTermObject](BiologicalProcessTermObject.md) | The ontology term that describes the nature of the association | [TermAssociation](TermAssociation.md) | | [type](type.md) | 0..1
[String](String.md) | The type of association | [Association](Association.md) | | [evidence](evidence.md) | *
[EvidenceItem](EvidenceItem.md) | The set of evidence items that support the association | [Association](Association.md) | | [provenances](provenances.md) | *
[ProvenanceInfo](ProvenanceInfo.md) | The set of provenance objects that provide metadata about who made the associ... | [Association](Association.md) | ## Usages | used by | used in | type | used | | --- | --- | --- | --- | | [Activity](Activity.md) | [part_of](part_of.md) | range | [BiologicalProcessAssociation](BiologicalProcessAssociation.md) | | [BiologicalProcessAssociation](BiologicalProcessAssociation.md) | [part_of](part_of.md) | range | [BiologicalProcessAssociation](BiologicalProcessAssociation.md) | ## Identifier and Mapping Information ### Schema Source * from schema: https://w3id.org/gocam ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | gocam:BiologicalProcessAssociation | | native | gocam:BiologicalProcessAssociation | ## LinkML Source ### Direct
name: BiologicalProcessAssociation
description: An association between an activity and a biological process term
from_schema: https://w3id.org/gocam
is_a: TermAssociation
slot_usage:
term:
name: term
range: BiologicalProcessTermObject
attributes:
happens_during:
name: happens_during
description: Optional extension describing the phase during which the BP takes
place
from_schema: https://w3id.org/gocam
domain_of:
- Activity
- BiologicalProcessAssociation
range: PhaseAssociation
part_of:
name: part_of
description: Optional extension allowing hierarchical nesting of BPs
from_schema: https://w3id.org/gocam
domain_of:
- Activity
- EnabledByGeneProductAssociation
- ProteinComplexHasPartAssociation
- BiologicalProcessAssociation
- CellularAnatomicalEntityAssociation
- CellTypeAssociation
- GrossAnatomyAssociation
range: BiologicalProcessAssociation
inlined: true
name: BiologicalProcessAssociation
description: An association between an activity and a biological process term
from_schema: https://w3id.org/gocam
is_a: TermAssociation
slot_usage:
term:
name: term
range: BiologicalProcessTermObject
attributes:
happens_during:
name: happens_during
description: Optional extension describing the phase during which the BP takes
place
from_schema: https://w3id.org/gocam
owner: BiologicalProcessAssociation
domain_of:
- Activity
- BiologicalProcessAssociation
range: PhaseAssociation
part_of:
name: part_of
description: Optional extension allowing hierarchical nesting of BPs
from_schema: https://w3id.org/gocam
owner: BiologicalProcessAssociation
domain_of:
- Activity
- EnabledByGeneProductAssociation
- ProteinComplexHasPartAssociation
- BiologicalProcessAssociation
- CellularAnatomicalEntityAssociation
- CellTypeAssociation
- GrossAnatomyAssociation
range: BiologicalProcessAssociation
inlined: true
term:
name: term
description: The ontology term that describes the nature of the association
from_schema: https://w3id.org/gocam
owner: BiologicalProcessAssociation
domain_of:
- MoleculeNode
- EvidenceItem
- EnabledByAssociation
- TermAssociation
range: BiologicalProcessTermObject
type:
name: type
description: The type of association.
comments:
- when instantiating Association objects in Python and other languages, it isn't
necessary to populate this, it is auto-populated from the object class.
from_schema: https://w3id.org/gocam
rank: 1000
designates_type: true
owner: BiologicalProcessAssociation
domain_of:
- Association
- Object
range: string
evidence:
name: evidence
description: The set of evidence items that support the association.
from_schema: https://w3id.org/gocam
rank: 1000
owner: BiologicalProcessAssociation
domain_of:
- Association
range: EvidenceItem
multivalued: true
inlined: true
provenances:
name: provenances
description: The set of provenance objects that provide metadata about who made
the association.
from_schema: https://w3id.org/gocam
owner: BiologicalProcessAssociation
domain_of:
- Model
- Activity
- EvidenceItem
- Association
range: ProvenanceInfo
multivalued: true
inlined: true
inlined_as_list: true