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| Organism | NCBI Taxonomy ID(s) | Entity Identifier space | All Annotations (including PAN-GO) | PAN-GO annotations only |
|---|---|---|---|---|
| Arabidopsis thaliana | NCBITaxon:3702 | mixed: AGI_LocusCode; TAIR; UniProtKB |
tair.gaf | PAN-GO tair.gaf |
| Bos taurus | NCBITaxon:9913 | mixed: UniProtKB; ComplexPortal | goa_cow.gaf | NO COW PANGO FILE Parse paint_other.gaf by taxon |
| Caenorhabditis elegans | NCBITaxon:6239 | mixed: WB; UniProtKB | wb.gaf | PAN-GO wb.gaf |
| Canis lupus familiaris | goa_dog.gaf | NO DOG PANGO FILE Parse paint_other.gaf by taxon |
||
| Danio rerio | zfin.gaf | PAN-GO zfin.gaf | ||
| Dictyostelium discoideum | dictybase.gaf | PAN-GO dictybase.gaf | ||
| Drosophila melanogaster | fb.gaf | PAN-GO fb.gaf | ||
| Escherichia coli | NCBITaxon:83333 | UniProtKB | ecocyc.gaf | PAN-GO ecocyc.gaf |
| CGD Multi-species | NCBITaxon:237561; NCBITaxon:284593; NCBITaxon:498019; NCBITaxon:573826; NCBITaxon:578454; NCBITaxon:1136231; NCBITaxon:294748; NCBITaxon:284592; NCBITaxon:379508; NCBITaxon:6911; NCBITaxon:294747; NCBITaxon:306902; NCBITaxon:294746 | mixed: CGD; UniProtKB | cgd.gaf | PAN-GO cgd.gaf |
Second option with common name
| Organism | Common name | NCBI Taxonomy ID(s) | Entity Identifier space | All Annotations (including PAN-GO) | PAN-GO annotations only |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Mouse-ear cress | NCBITaxon:3702 | mixed: AGI_LocusCode; TAIR; UniProtKB |
tair.gaf | PAN-GO tair.gaf |
| Bos taurus | cow | NCBITaxon:9913 | mixed: UniProtKB; ComplexPortal | goa_cow.gaf | No specific PAN-GO file Parse paint_other.gaf by taxon |
| Caenorhabditis elegans | worm | NCBITaxon:6239 | mixed: WB; UniProtKB | wb.gaf | PAN-GO wb.gaf |
| Canis lupus familiaris | dog | goa_dog.gaf | No specific PAN-GO file Parse paint_other.gaf by taxon |
||
| Danio rerio | zebrafish | zfin.gaf | PAN-GO zfin.gaf | ||
| Dictyostelium discoideum | slime mold | dictybase.gaf | PAN-GO dictybase.gaf | ||
| Drosophila melanogaster | fruit fly | fb.gaf | PAN-GO fb.gaf | ||
| Escherichia coli | NCBITaxon:83333 | UniProtKB | ecocyc.gaf | PAN-GO ecocyc.gaf | |
| CGD Multi-species | fungal pathogenic yeasts | NCBITaxon:237561 NCBITaxon:284593 NCBITaxon:498019 NCBITaxon:573826 NCBITaxon:578454 NCBITaxon:1136231 NCBITaxon:294748 NCBITaxon:284592 NCBITaxon:379508 NCBITaxon:36911 NCBITaxon:294747 NCBITaxon:306902 NCBITaxon:294746 |
mixed: CGD; UniProtKB | cgd.gaf | PAN-GO cgd.gaf |