Class: MoleculeNode
An individual molecule or chemical entity in a causal model, representing a specific occurrence of a molecule that participates in activities as an input or output and may be localized to a particular cellular location.
URI: [gocam:MoleculeNode](https://w3id.org/gocam/MoleculeNode)
[Uriorcurie](Uriorcurie.md) | Identifier of the molecule node | direct | | [term](term.md) | 1
[MoleculeTermObject](MoleculeTermObject.md) | The molecule term associated with the molecule node | direct | | [located_in](located_in.md) | 0..1
[CellularAnatomicalEntityAssociation](CellularAnatomicalEntityAssociation.md) | The cellular location in which the molecule is located | direct | ## Usages | used by | used in | type | used | | --- | --- | --- | --- | | [Model](Model.md) | [molecules](molecules.md) | range | [MoleculeNode](MoleculeNode.md) | | [MoleculeAssociation](MoleculeAssociation.md) | [molecule](molecule.md) | range | [MoleculeNode](MoleculeNode.md) | ## Identifier and Mapping Information ### Schema Source * from schema: https://w3id.org/gocam ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | gocam:MoleculeNode | | native | gocam:MoleculeNode | ## LinkML Source ### Direct
### Induced
classDiagram
class MoleculeNode
click MoleculeNode href "../MoleculeNode/"
MoleculeNode : id
MoleculeNode : located_in
MoleculeNode --> "0..1" CellularAnatomicalEntityAssociation : located_in
click CellularAnatomicalEntityAssociation href "../CellularAnatomicalEntityAssociation/"
MoleculeNode : term
MoleculeNode --> "1" MoleculeTermObject : term
click MoleculeTermObject href "../MoleculeTermObject/"
## Slots
| Name | Cardinality and Range | Description | Inheritance |
| --- | --- | --- | --- |
| [id](id.md) | 1 [Uriorcurie](Uriorcurie.md) | Identifier of the molecule node | direct | | [term](term.md) | 1
[MoleculeTermObject](MoleculeTermObject.md) | The molecule term associated with the molecule node | direct | | [located_in](located_in.md) | 0..1
[CellularAnatomicalEntityAssociation](CellularAnatomicalEntityAssociation.md) | The cellular location in which the molecule is located | direct | ## Usages | used by | used in | type | used | | --- | --- | --- | --- | | [Model](Model.md) | [molecules](molecules.md) | range | [MoleculeNode](MoleculeNode.md) | | [MoleculeAssociation](MoleculeAssociation.md) | [molecule](molecule.md) | range | [MoleculeNode](MoleculeNode.md) | ## Identifier and Mapping Information ### Schema Source * from schema: https://w3id.org/gocam ## Mappings | Mapping Type | Mapped Value | | --- | --- | | self | gocam:MoleculeNode | | native | gocam:MoleculeNode | ## LinkML Source ### Direct
name: MoleculeNode
description: An individual molecule or chemical entity in a causal model, representing
a specific occurrence of a molecule that participates in activities as an input
or output and may be localized to a particular cellular location.
from_schema: https://w3id.org/gocam
attributes:
id:
name: id
id_prefixes:
- gomodel
description: Identifier of the molecule node.
examples:
- value: gomodel:63f809ec00000701/63f809ec00000733
description: A molecule node of the model representing tRNA precursor (CHEBI:10668)
that is an input to tRNA-specific ribonuclease activity (GO:0004549)
from_schema: https://w3id.org/gocam
identifier: true
domain_of:
- Model
- Activity
- MoleculeNode
- Object
range: uriorcurie
term:
name: term
description: The molecule term associated with the molecule node
from_schema: https://w3id.org/gocam
domain_of:
- MoleculeNode
- EvidenceItem
- EnabledByAssociation
- TermAssociation
range: MoleculeTermObject
required: true
located_in:
name: located_in
description: The cellular location in which the molecule is located
from_schema: https://w3id.org/gocam
rank: 1000
domain_of:
- MoleculeNode
range: CellularAnatomicalEntityAssociation
inlined: true
name: MoleculeNode
description: An individual molecule or chemical entity in a causal model, representing
a specific occurrence of a molecule that participates in activities as an input
or output and may be localized to a particular cellular location.
from_schema: https://w3id.org/gocam
attributes:
id:
name: id
id_prefixes:
- gomodel
description: Identifier of the molecule node.
examples:
- value: gomodel:63f809ec00000701/63f809ec00000733
description: A molecule node of the model representing tRNA precursor (CHEBI:10668)
that is an input to tRNA-specific ribonuclease activity (GO:0004549)
from_schema: https://w3id.org/gocam
identifier: true
owner: MoleculeNode
domain_of:
- Model
- Activity
- MoleculeNode
- Object
range: uriorcurie
required: true
term:
name: term
description: The molecule term associated with the molecule node
from_schema: https://w3id.org/gocam
owner: MoleculeNode
domain_of:
- MoleculeNode
- EvidenceItem
- EnabledByAssociation
- TermAssociation
range: MoleculeTermObject
required: true
located_in:
name: located_in
description: The cellular location in which the molecule is located
from_schema: https://w3id.org/gocam
rank: 1000
owner: MoleculeNode
domain_of:
- MoleculeNode
range: CellularAnatomicalEntityAssociation
inlined: true