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Slot: annotation_extensions

Annotation extensions allow GO terms in annotations to be further specified, using gene products, chemicals, cell types, anatomical structures, to provide additional biological context. The cross-reference is prefaced by an appropriate relationship from the Relation Ontology.

URI: go_standard_annotation_schema:annotation_extensions

Applicable Classes

Name Description Modifies Slot
Annotation An association between a gene product and a GO term, with an evidence code, a... no

Properties

Type and Range

Property Value
Range AnnotationExtension
Domain Of Annotation

Cardinality and Requirements

Property Value
Multivalued Yes

Notes

  • Annotation extensions do not have a unique identifier, so the schema indicates they are inlined as a list. This makes change operations that target a specific annotation extension more difficult.

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self go_standard_annotation_schema:annotation_extensions
native go_standard_annotation_schema:annotation_extensions

LinkML Source

name: annotation_extensions
description: Annotation extensions allow GO terms in annotations to be further specified,
  using gene products, chemicals, cell types, anatomical structures, to provide additional
  biological context. The cross-reference is prefaced by an appropriate relationship
  from the Relation Ontology.
notes:
- Annotation extensions do not have a unique identifier, so the schema indicates they
  are inlined as a list. This makes change operations that target a specific annotation
  extension more difficult.
from_schema: https://w3id.org/geneontology/go-standard-annotation-schema
rank: 1000
domain_of:
- Annotation
range: AnnotationExtension
required: false
multivalued: true
inlined: true
inlined_as_list: true