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Class: TermAssociation

An association between an activity and a term, potentially with extensions

  • NOTE: this is an abstract class and should not be instantiated directly

URI: gocam:TermAssociation

classDiagram class TermAssociation click TermAssociation href "../TermAssociation" Association <|-- TermAssociation click Association href "../Association" TermAssociation <|-- MolecularFunctionAssociation click MolecularFunctionAssociation href "../MolecularFunctionAssociation" TermAssociation <|-- BiologicalProcessAssociation click BiologicalProcessAssociation href "../BiologicalProcessAssociation" TermAssociation <|-- CellularAnatomicalEntityAssociation click CellularAnatomicalEntityAssociation href "../CellularAnatomicalEntityAssociation" TermAssociation <|-- CellTypeAssociation click CellTypeAssociation href "../CellTypeAssociation" TermAssociation <|-- GrossAnatomyAssociation click GrossAnatomyAssociation href "../GrossAnatomyAssociation" TermAssociation <|-- MoleculeAssociation click MoleculeAssociation href "../MoleculeAssociation" TermAssociation : evidence TermAssociation --> "*" EvidenceItem : evidence click EvidenceItem href "../EvidenceItem" TermAssociation : provenances TermAssociation --> "*" ProvenanceInfo : provenances click ProvenanceInfo href "../ProvenanceInfo" TermAssociation : term TermAssociation --> "0..1" TermObject : term click TermObject href "../TermObject" TermAssociation : type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
term 0..1
TermObject		 The ontology term that describes the nature of the association direct
type 0..1
String		 Association
evidence *
EvidenceItem		 Association
provenances *
ProvenanceInfo		 Association

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/gocam

Mappings

Mapping Type Mapped Value
self gocam:TermAssociation
native gocam:TermAssociation

LinkML Source

Direct

name: TermAssociation
description: An association between an activity and a term, potentially with extensions
from_schema: https://w3id.org/gocam
is_a: Association
abstract: true
attributes:
  term:
    name: term
    description: The ontology term that describes the nature of the association
    from_schema: https://w3id.org/gocam
    domain_of:
    - EvidenceItem
    - EnabledByAssociation
    - TermAssociation
    range: TermObject

Induced

name: TermAssociation
description: An association between an activity and a term, potentially with extensions
from_schema: https://w3id.org/gocam
is_a: Association
abstract: true
attributes:
  term:
    name: term
    description: The ontology term that describes the nature of the association
    from_schema: https://w3id.org/gocam
    alias: term
    owner: TermAssociation
    domain_of:
    - EvidenceItem
    - EnabledByAssociation
    - TermAssociation
    range: TermObject
  type:
    name: type
    from_schema: https://w3id.org/gocam
    rank: 1000
    designates_type: true
    alias: type
    owner: TermAssociation
    domain_of:
    - Association
    - Object
    range: string
  evidence:
    name: evidence
    from_schema: https://w3id.org/gocam
    rank: 1000
    alias: evidence
    owner: TermAssociation
    domain_of:
    - Association
    range: EvidenceItem
    multivalued: true
    inlined: true
  provenances:
    name: provenances
    from_schema: https://w3id.org/gocam
    alias: provenances
    owner: TermAssociation
    domain_of:
    - Model
    - Activity
    - EvidenceItem
    - Association
    range: ProvenanceInfo
    multivalued: true
    inlined: true
    inlined_as_list: true