Class: EvidenceItem

An individual piece of evidence that is associated with an assertion in a model

classDiagram class EvidenceItem click EvidenceItem href "../EvidenceItem" EvidenceItem : provenances EvidenceItem --> "*" ProvenanceInfo : provenances click ProvenanceInfo href "../ProvenanceInfo" EvidenceItem : reference EvidenceItem --> "0..1" PublicationObject : reference click PublicationObject href "../PublicationObject" EvidenceItem : term EvidenceItem --> "0..1" EvidenceTermObject : term click EvidenceTermObject href "../EvidenceTermObject" EvidenceItem : with_objects EvidenceItem --> "*" Object : with_objects click Object href "../Object"

Slots

Name	Cardinality and Range	Description	Inheritance
term	0..1 EvidenceTermObject	The ECO term representing the type of evidence	direct
reference	0..1 PublicationObject	The publication of reference that describes the evidence	direct
with_objects	* Object	Supporting database entities or terms	direct
provenances	* ProvenanceInfo	Provenance about the assertion, e	direct

Usages

used by	used in	type	used
Association	evidence	range	EvidenceItem
EnabledByAssociation	evidence	range	EvidenceItem
EnabledByGeneProductAssociation	evidence	range	EvidenceItem
EnabledByProteinComplexAssociation	evidence	range	EvidenceItem
CausalAssociation	evidence	range	EvidenceItem
TermAssociation	evidence	range	EvidenceItem
MolecularFunctionAssociation	evidence	range	EvidenceItem
BiologicalProcessAssociation	evidence	range	EvidenceItem
CellularAnatomicalEntityAssociation	evidence	range	EvidenceItem
CellTypeAssociation	evidence	range	EvidenceItem
GrossAnatomyAssociation	evidence	range	EvidenceItem
MoleculeAssociation	evidence	range	EvidenceItem

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/gocam

Mappings

Mapping Type	Mapped Value
self	gocam:EvidenceItem
native	gocam:EvidenceItem

LinkML Source

Direct

name: EvidenceItem
description: An individual piece of evidence that is associated with an assertion
  in a model
from_schema: https://w3id.org/gocam
attributes:
  term:
    name: term
    description: The ECO term representing the type of evidence
    from_schema: https://w3id.org/gocam
    rank: 1000
    domain_of:
    - EvidenceItem
    - EnabledByAssociation
    - TermAssociation
    range: EvidenceTermObject
  reference:
    name: reference
    description: The publication of reference that describes the evidence
    from_schema: https://w3id.org/gocam
    rank: 1000
    domain_of:
    - EvidenceItem
    range: PublicationObject
  with_objects:
    name: with_objects
    description: Supporting database entities or terms
    from_schema: https://w3id.org/gocam
    aliases:
    - with
    - with/from
    rank: 1000
    domain_of:
    - EvidenceItem
    range: Object
    multivalued: true
  provenances:
    name: provenances
    description: Provenance about the assertion, e.g. who made it
    from_schema: https://w3id.org/gocam
    domain_of:
    - Model
    - Activity
    - EvidenceItem
    - Association
    range: ProvenanceInfo
    multivalued: true
    inlined: true
    inlined_as_list: true

Induced

name: EvidenceItem
description: An individual piece of evidence that is associated with an assertion
  in a model
from_schema: https://w3id.org/gocam
attributes:
  term:
    name: term
    description: The ECO term representing the type of evidence
    from_schema: https://w3id.org/gocam
    rank: 1000
    alias: term
    owner: EvidenceItem
    domain_of:
    - EvidenceItem
    - EnabledByAssociation
    - TermAssociation
    range: EvidenceTermObject
  reference:
    name: reference
    description: The publication of reference that describes the evidence
    from_schema: https://w3id.org/gocam
    rank: 1000
    alias: reference
    owner: EvidenceItem
    domain_of:
    - EvidenceItem
    range: PublicationObject
  with_objects:
    name: with_objects
    description: Supporting database entities or terms
    from_schema: https://w3id.org/gocam
    aliases:
    - with
    - with/from
    rank: 1000
    alias: with_objects
    owner: EvidenceItem
    domain_of:
    - EvidenceItem
    range: Object
    multivalued: true
  provenances:
    name: provenances
    description: Provenance about the assertion, e.g. who made it
    from_schema: https://w3id.org/gocam
    alias: provenances
    owner: EvidenceItem
    domain_of:
    - Model
    - Activity
    - EvidenceItem
    - Association
    range: ProvenanceInfo
    multivalued: true
    inlined: true
    inlined_as_list: true