Slot: uniprot_proteome

The UniProt proteome accession for the set of proteins that constitute an organism's proteome.

URI: go_standard_annotation_schema:uniprot_proteome

Applicable Classes

Name	Description	Modifies Slot
GeneProductProperties	The closed set of properties associated with an entity in a GPI row	no

Properties

Type and Range

Property	Value
Range	String
Domain Of	GeneProductProperties

Cardinality and Requirements

Property	Value
### Slot Characteristics

Property	Value
Owner	GeneProductProperties

Value Constraints

Property	Value
Regex Pattern	^UP[0-9]+$

Notes

• The GPI grammar says this should be a prefixed identifier, but the example shows an unprefixed identifier. It is unclear what is actually used in practice. This is being modeled as an unprefixed identifier for now.

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/geneontology/go-standard-annotation-schema

Mappings

Mapping Type	Mapped Value
self	go_standard_annotation_schema:uniprot_proteome
native	go_standard_annotation_schema:uniprot_proteome

LinkML Source

name: uniprot_proteome
description: The UniProt proteome accession for the set of proteins that constitute
  an organism's proteome.
notes:
- The GPI grammar says this should be a prefixed identifier, but the example shows
  an unprefixed identifier. It is unclear what is actually used in practice. This
  is being modeled as an unprefixed identifier for now.
from_schema: https://w3id.org/geneontology/go-standard-annotation-schema
rank: 1000
owner: GeneProductProperties
domain_of:
- GeneProductProperties
range: string
required: false
pattern: ^UP[0-9]+$