Slot: canonical_object_id
If the entity being annotated is a gene, gene-centric reference protein or a protein complex, this should repeat the ID of the object being annotated. If the entity being annotated is derived from a gene product such as a protein isoform, a modified protein or a processed transcript (e. g. miRNA), then this refers to the gene-centric ID of the annotated entity.
URI: go_standard_annotation_schema:canonical_object_id
Applicable Classes
| Name |
Description |
Modifies Slot |
| Entity |
An annotatable biological entity for an organism: protein-coding genes, non-c... |
no |
Properties
Type and Range
Cardinality and Requirements
| Property |
Value |
| Required |
Yes |
Notes
- The GPI grammar says that column 8 has cardinality 0..*,
( ID ( '|' ID )* )? but the narrative spec says that it has cardinality 1. The narrative spec seems more appropriate, so that is what is implemented here. Decide if that is correct.
Schema Source
Mappings
| Mapping Type |
Mapped Value |
| self |
go_standard_annotation_schema:canonical_object_id |
| native |
go_standard_annotation_schema:canonical_object_id |
LinkML Source
name: canonical_object_id
description: If the entity being annotated is a gene, gene-centric reference protein
or a protein complex, this should repeat the ID of the object being annotated. If
the entity being annotated is derived from a gene product such as a protein isoform,
a modified protein or a processed transcript (e. g. miRNA), then this refers to
the gene-centric ID of the annotated entity.
notes:
- The GPI grammar says that column 8 has cardinality 0..*, `( ID ( '|' ID )* )?` but
the narrative spec says that it has cardinality 1. The narrative spec seems more
appropriate, so that is what is implemented here. Decide if that is correct.
from_schema: https://w3id.org/geneontology/go-standard-annotation-schema
rank: 1000
domain_of:
- Entity
range: external_identifier
required: true