Enum: Annotation Extension Relation (AnnotationExtensionRelation)

The relationship between a GO term and an entity in an annotation extension.

URI: go_standard_annotation_schema:AnnotationExtensionRelation

Permissible Values

Value	Meaning	Description	Additional Info
BFO:0000050	BFO:0000050		Title: part of
BFO:0000051	BFO:0000051		Title: has part
BFO:0000066	BFO:0000066		Title: occurs in
RO:0002220	RO:0002220		Title: adjacent to
RO:0002131	RO:0002131		Title: overlaps
RO:0002490	RO:0002490		Title: existence overlaps
RO:0002491	RO:0002491		Title: existence starts and ends during
RO:0002333	RO:0002333		Title: enabled by
RO:0002326	RO:0002326		Title: contributes to
RO:0002233	RO:0002233		Title: has input
RO:0002234	RO:0002234		Title: has output
RO:0004009	RO:0004009		Title: has primary input
RO:0004008	RO:0004008		Title: has primary output
RO:0002339	RO:0002339		Title: has target end location
RO:0002338	RO:0002338		Title: has target start location
RO:0002313	RO:0002313		Title: transports or maintains localization of
RO:0002413	RO:0002413		Title: provides input for
RO:0002629	RO:0002629		Title: directly positively regulates
RO:0012000	RO:0012000		Title: has small molecule regulator
RO:0012001	RO:0012001		Title: has small molecule activator
RO:0012002	RO:0012002		Title: has small molecule inhibitor
RO:0012004	RO:0012004		Title: is small molecule regulator of
RO:0012005	RO:0012005		Title: is small molecule activator of
RO:0012006	RO:0012006		Title: is small molecule inhibitor of
RO:0001025	RO:0001025		Title: located in
RO:0001015	RO:0001015		Title: location of
RO:0002432	RO:0002432		Title: is active in
RO:0002092	RO:0002092		Title: happens during
RO:0002211	RO:0002211		Title: regulates
RO:0002212	RO:0002212		Title: negatively regulates
RO:0002213	RO:0002213		Title: positively regulates
RO:0002578	RO:0002578		Title: directly regulates
RO:0002630	RO:0002630		Title: directly negatively regulates
RO:0012012	RO:0012012		Title: indirectly regulates
RO:0002407	RO:0002407		Title: indirectly positively regulates
RO:0002409	RO:0002409		Title: indirectly negatively regulates
RO:0012009	RO:0012009		Title: constitutively upstream of
RO:0019004	RO:0019004		Title: immediately constitutively upstream of
RO:0012010	RO:0012010		Title: removes input for
RO:0002418	RO:0002418		Title: causally upstream of or within
RO:0004046	RO:0004046		Title: causally upstream of or within, negative effect
RO:0004047	RO:0004047		Title: causally upstream of or within, positive effect
RO:0002411	RO:0002411		Title: causally upstream of
RO:0002305	RO:0002305		Title: causally upstream of, negative effect
RO:0002304	RO:0002304		Title: causally upstream of, positive effect
RO:0012003	RO:0012003		Title: acts on population of
RO:0002296	RO:0002296		Title: results in development of
RO:0002297	RO:0002297		Title: results in formation of anatomical entity
RO:0002298	RO:0002298		Title: results in morphogenesis of
RO:0002315	RO:0002315		Title: results in acquisition of features of
RO:0002348	RO:0002348		Title: results in commitment to
RO:0002349	RO:0002349		Title: results in determination of
RO:0002356	RO:0002356		Title: results in specification of
RO:0002588	RO:0002588		Title: results in assembly of
RO:0002590	RO:0002590		Title: results in disassembly of
RO:0002592	RO:0002592		Title: results in organization of
RO:0002299	RO:0002299		Title: results in maturation of
RO:0002343	RO:0002343		Title: results in growth of
RO:0002565	RO:0002565		Title: results in movement of
RO:0002591	RO:0002591		Title: results in remodeling of

Slots

Name	Description
extension_relation	A term from the Relation Ontology that describes how the GO term in the exten...

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/geneontology/go-standard-annotation-schema

LinkML Source

name: AnnotationExtensionRelation
description: The relationship between a GO term and an entity in an annotation extension.
title: Annotation Extension Relation
from_schema: https://w3id.org/geneontology/go-standard-annotation-schema
rank: 1000
permissible_values:
  BFO:0000050:
    text: BFO:0000050
    meaning: BFO:0000050
    title: part of
  BFO:0000051:
    text: BFO:0000051
    meaning: BFO:0000051
    title: has part
  BFO:0000066:
    text: BFO:0000066
    meaning: BFO:0000066
    title: occurs in
  RO:0002220:
    text: RO:0002220
    meaning: RO:0002220
    title: adjacent to
  RO:0002131:
    text: RO:0002131
    meaning: RO:0002131
    title: overlaps
  RO:0002490:
    text: RO:0002490
    meaning: RO:0002490
    title: existence overlaps
  RO:0002491:
    text: RO:0002491
    meaning: RO:0002491
    title: existence starts and ends during
  RO:0002333:
    text: RO:0002333
    meaning: RO:0002333
    title: enabled by
  RO:0002326:
    text: RO:0002326
    meaning: RO:0002326
    title: contributes to
  RO:0002233:
    text: RO:0002233
    meaning: RO:0002233
    title: has input
  RO:0002234:
    text: RO:0002234
    meaning: RO:0002234
    title: has output
  RO:0004009:
    text: RO:0004009
    meaning: RO:0004009
    title: has primary input
  RO:0004008:
    text: RO:0004008
    meaning: RO:0004008
    title: has primary output
  RO:0002339:
    text: RO:0002339
    meaning: RO:0002339
    title: has target end location
  RO:0002338:
    text: RO:0002338
    meaning: RO:0002338
    title: has target start location
  RO:0002313:
    text: RO:0002313
    meaning: RO:0002313
    title: transports or maintains localization of
  RO:0002413:
    text: RO:0002413
    meaning: RO:0002413
    title: provides input for
  RO:0002629:
    text: RO:0002629
    meaning: RO:0002629
    title: directly positively regulates
  RO:0012000:
    text: RO:0012000
    meaning: RO:0012000
    title: has small molecule regulator
  RO:0012001:
    text: RO:0012001
    meaning: RO:0012001
    title: has small molecule activator
  RO:0012002:
    text: RO:0012002
    meaning: RO:0012002
    title: has small molecule inhibitor
  RO:0012004:
    text: RO:0012004
    meaning: RO:0012004
    title: is small molecule regulator of
  RO:0012005:
    text: RO:0012005
    meaning: RO:0012005
    title: is small molecule activator of
  RO:0012006:
    text: RO:0012006
    meaning: RO:0012006
    title: is small molecule inhibitor of
  RO:0001025:
    text: RO:0001025
    meaning: RO:0001025
    title: located in
  RO:0001015:
    text: RO:0001015
    meaning: RO:0001015
    title: location of
  RO:0002432:
    text: RO:0002432
    meaning: RO:0002432
    title: is active in
  RO:0002092:
    text: RO:0002092
    meaning: RO:0002092
    title: happens during
  RO:0002211:
    text: RO:0002211
    meaning: RO:0002211
    title: regulates
  RO:0002212:
    text: RO:0002212
    meaning: RO:0002212
    title: negatively regulates
  RO:0002213:
    text: RO:0002213
    meaning: RO:0002213
    title: positively regulates
  RO:0002578:
    text: RO:0002578
    meaning: RO:0002578
    title: directly regulates
  RO:0002630:
    text: RO:0002630
    meaning: RO:0002630
    title: directly negatively regulates
  RO:0012012:
    text: RO:0012012
    meaning: RO:0012012
    title: indirectly regulates
  RO:0002407:
    text: RO:0002407
    meaning: RO:0002407
    title: indirectly positively regulates
  RO:0002409:
    text: RO:0002409
    meaning: RO:0002409
    title: indirectly negatively regulates
  RO:0012009:
    text: RO:0012009
    meaning: RO:0012009
    title: constitutively upstream of
  RO:0019004:
    text: RO:0019004
    meaning: RO:0019004
    title: immediately constitutively upstream of
  RO:0012010:
    text: RO:0012010
    meaning: RO:0012010
    title: removes input for
  RO:0002418:
    text: RO:0002418
    meaning: RO:0002418
    title: causally upstream of or within
  RO:0004046:
    text: RO:0004046
    meaning: RO:0004046
    title: causally upstream of or within, negative effect
  RO:0004047:
    text: RO:0004047
    meaning: RO:0004047
    title: causally upstream of or within, positive effect
  RO:0002411:
    text: RO:0002411
    meaning: RO:0002411
    title: causally upstream of
  RO:0002305:
    text: RO:0002305
    meaning: RO:0002305
    title: causally upstream of, negative effect
  RO:0002304:
    text: RO:0002304
    meaning: RO:0002304
    title: causally upstream of, positive effect
  RO:0012003:
    text: RO:0012003
    meaning: RO:0012003
    title: acts on population of
  RO:0002296:
    text: RO:0002296
    meaning: RO:0002296
    title: results in development of
  RO:0002297:
    text: RO:0002297
    meaning: RO:0002297
    title: results in formation of anatomical entity
  RO:0002298:
    text: RO:0002298
    meaning: RO:0002298
    title: results in morphogenesis of
  RO:0002315:
    text: RO:0002315
    meaning: RO:0002315
    title: results in acquisition of features of
  RO:0002348:
    text: RO:0002348
    meaning: RO:0002348
    title: results in commitment to
  RO:0002349:
    text: RO:0002349
    meaning: RO:0002349
    title: results in determination of
  RO:0002356:
    text: RO:0002356
    meaning: RO:0002356
    title: results in specification of
  RO:0002588:
    text: RO:0002588
    meaning: RO:0002588
    title: results in assembly of
  RO:0002590:
    text: RO:0002590
    meaning: RO:0002590
    title: results in disassembly of
  RO:0002592:
    text: RO:0002592
    meaning: RO:0002592
    title: results in organization of
  RO:0002299:
    text: RO:0002299
    meaning: RO:0002299
    title: results in maturation of
  RO:0002343:
    text: RO:0002343
    meaning: RO:0002343
    title: results in growth of
  RO:0002565:
    text: RO:0002565
    meaning: RO:0002565
    title: results in movement of
  RO:0002591:
    text: RO:0002591
    meaning: RO:0002591
    title: results in remodeling of